BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002A08LP1|AL424889
(1011 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1088 1454 0.0
>3x_Contig1088
Length = 4585
Score = 1454 bits (732), Expect = 0.0
Identities = 764/770 (99%), Gaps = 4/770 (0%)
Strand = Plus / Minus
Query: 1 atcttctcttgtaaacagttaaattgtgtttgaaagcatacaaaacatataatgctccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4347 atcttctcttgtaaacagttaaattgtgtttgaaagcatacaaaacatataatgctccta 4288
Query: 61 aaactagagtcaaataatgaccaacaatccaaattgccctttgcttggctttgatatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4287 aaactagagtcaaataatgaccaacaatccaaattgccctttgcttggctttgatatcaa 4228
Query: 121 ccttggaatccttcttacggataactttcattgtgtctcttttatttccgtgaataaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4227 ccttggaatccttcttacggataactttcattgtgtctcttttatttccgtgaataaaac 4168
Query: 181 agctagtaccaacaatttccaaacaaaagtattgcaaactatttgctcagataaataaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4167 agctagtaccaacaatttccaaacaaaagtattgcaaactatttgctcagataaataaat 4108
Query: 241 ggcaattgcaataaacggaagagcttcagcaggtctggaaacaagctatccatcttccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4107 ggcaattgcaataaacggaagagcttcagcaggtctggaaacaagctatccatcttccaa 4048
Query: 301 gtttttaaacccttataatatttgattgttccgtgtgtattttcaacaaagcaatttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4047 gtttttaaacccttataatatttgattgttccgtgtgtattttcaacaaagcaatttttt 3988
Query: 361 aaaacctttctttgcattagatcgaggcgaaagcgaaaataatgttcgcagcttatttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3987 aaaacctttctttgcattagatcgaggcgaaagcgaaaataatgttcgcagcttatttca 3928
Query: 421 tgtcatctcatcggtattaaaagctgggtaaacttcacaagatgtaaataaaataataca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3927 tgtcatctcatcggtattaaaagctgggtaaacttcacaagatgtaaataaaataataca 3868
Query: 481 tagatagttgctgtaagtcttgagtgagggatattagtatttgatcaaatggrtcttgtt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3867 tagatagttgctgtaagtcttgagtgagggatattagtatttgatcaaatggatcttgtt 3808
Query: 541 tgtacttagttttaatagacttttgaatatctgtagcacgcgatttttcctcgtttgatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3807 tgtacttagttttaatagacttttgaatatctgtagcacgcgatttttcctcgtttgatt 3748
Query: 601 caaacttaggatcttttatgatttgagcagttggacatttcagtttctcttactcacttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3747 caaacttaggatcttttatgatttgagcagttggacatttcagtttctcttactcacttc 3688
Query: 661 atctcggttgag-aatagtgaaacacttaagagagcactaatctgtgtcaggacgctatt 719
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3687 atctcggttgagcaatagtgaaacacttaagaaagcactaatctgtgtcaggacgctatt 3628
Query: 720 tgatctatagatg-gcaaag-tcaagatttgaatacgtaag-gcaatttg 766
||||||||||||| |||||| |||||||||||||||||||| ||||||||
Sbjct: 3627 tgatctatagatgcgcaaagctcaagatttgaatacgtaagcgcaatttg 3578
Score = 312 bits (157), Expect = 1e-84
Identities = 202/213 (94%), Gaps = 4/213 (1%)
Strand = Plus / Minus
Query: 781 ttgcttccg-gatacatacatagtggtaagagttgatgggaagaaattccatgaattctc 839
||||||||| |||||||||||| | |||||||||||||||||||||||||||||| | |
Sbjct: 3557 ttgcttccgcgatacatacatatttttaagagttgatgggaagaaattccatgaatgcgc 3498
Query: 840 aaaatactataatttcgctaaaccaaatgatgagagggcattgaaactaatgaacgctgc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3497 aaaatactataatttcgctaaaccaaatgatgagagggcattgaaactaatgaacgctgc 3438
Query: 900 tgctaaaaatgtgttcatgcagtataaacaagaaatgatttgtgcgtwtggtg-aagcga 958
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 3437 tgctaaaaatgtgttcatgcagtataaacaagaaatgatttgtgcgtatggtgaaagcga 3378
Query: 959 tg-atactcattca-tttgragagagatacaaa 989
|| ||||||||||| |||| |||||||||||||
Sbjct: 3377 tgaatactcattcattttgaagagagatacaaa 3345
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8714
Number of Sequences: 1807
Number of extensions: 8714
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 1011
length of database: 10,358,551
effective HSP length: 16
effective length of query: 995
effective length of database: 10,329,639
effective search space: 10277990805
effective search space used: 10277990805
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)